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Cluster: CGMR042976_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83422 k141_83422_52 59512 60069 + 2.A.107.1.1
TC k141_83422 k141_83422_53 60269 61216 + 1.A.35.1.2
pfam k141_83422 k141_83422_54 61434 63257 + S1 | S1 | S1 | S1 | S1 | S1 | S1_RRP5
pfam k141_83422 k141_83422_55 63266 64252 + Lactamase_B | Lactamase_B_2 | Lactamase_B_2
CAZyme k141_83422 k141_83422_56 64419 65402 + GH73
pfam k141_83422 k141_83422_57 65498 66529 + YceG
pfam k141_83422 k141_83422_58 66538 67077 - C_GCAxxG_C_C
TC k141_83422 k141_83422_59 67481 68653 + 9.B.146.1.4
Gene ID: k141_83422_52
Type: TC
Location: 59512 - 60069 (+)
Gene ID: k141_83422_53
Type: TC
Location: 60269 - 61216 (+)
Gene ID: k141_83422_54
Type: pfam
Location: 61434 - 63257 (+)
Gene ID: k141_83422_55
Type: pfam
Location: 63266 - 64252 (+)
Gene ID: k141_83422_56
Type: CAZyme
Location: 64419 - 65402 (+)
Gene ID: k141_83422_57
Type: pfam
Location: 65498 - 66529 (+)
Gene ID: k141_83422_58
Type: pfam
Location: 66538 - 67077 (-)
Gene ID: k141_83422_59
Type: TC
Location: 67481 - 68653 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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