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Cluster: CGMR042976_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55991 k141_55991_50 48676 51270 - 2.A.21.3.7
TF k141_55991 k141_55991_51 51267 51995 - GntR
pfam k141_55991 k141_55991_52 52278 53195 + DHDPS
CAZyme k141_55991 k141_55991_53 53195 54874 + GH33
NULL(UNKNOWN) k141_55991 k141_55991_54 54882 54974 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_55991 k141_55991_55 54977 58156 + 1.B.14.6.1
pfam k141_55991 k141_55991_56 58189 59643 + SusD_RagB | SusD-like_3
CAZyme k141_55991 k141_55991_57 59645 60796 + GH33
CAZyme k141_55991 k141_55991_58 60793 61926 + GH33
sulfatase k141_55991 k141_55991_59 61963 63534 + S1_30
CAZyme k141_55991 k141_55991_60 63711 65795 + GH3
Gene ID: k141_55991_50
Type: TC
Location: 48676 - 51270 (-)
Gene ID: k141_55991_51
Type: TF
Location: 51267 - 51995 (-)
Gene ID: k141_55991_52
Type: pfam
Location: 52278 - 53195 (+)
Gene ID: k141_55991_53
Type: CAZyme
Location: 53195 - 54874 (+)
Gene ID: k141_55991_54
Type:
Location: 54882 - 54974 (+)
Gene ID: k141_55991_55
Type: TC
Location: 54977 - 58156 (+)
Gene ID: k141_55991_56
Type: pfam
Location: 58189 - 59643 (+)
Gene ID: k141_55991_57
Type: CAZyme
Location: 59645 - 60796 (+)
Gene ID: k141_55991_58
Type: CAZyme
Location: 60793 - 61926 (+)
Gene ID: k141_55991_59
Type: sulfatase
Location: 61963 - 63534 (+)
Gene ID: k141_55991_60
Type: CAZyme
Location: 63711 - 65795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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