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Cluster: CGMR042535_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_26900 k141_26900_3 2142 2888 + 3.A.1.16.1
TC k141_26900 k141_26900_4 2885 3667 + 3.A.1.17.7
pfam k141_26900 k141_26900_5 3737 4528 + PNP_UDP_1
TC k141_26900 k141_26900_6 4686 5783 + 3.A.1.17.11
TC k141_26900 k141_26900_7 5827 6606 + 3.A.1.17.7
pfam k141_26900 k141_26900_8 6822 7577 + Exo_endo_phos
TC k141_26900 k141_26900_9 7746 9599 + 3.A.1.120.6
CAZyme k141_26900 k141_26900_10 9677 11611 + GH13_11
TF k141_26900 k141_26900_11 11800 13404 + HTH_AraC | HTH_AraC
TC k141_26900 k141_26900_12 13404 14180 + 8.A.59.2.1
pfam k141_26900 k141_26900_13 14170 15591 + ABC_tran
pfam k141_26900 k141_26900_14 15591 16820 + Peripla_BP_4
TC k141_26900 k141_26900_15 16810 17766 + 3.A.1.2.3
TC k141_26900 k141_26900_16 17970 19649 + 3.A.1.5.22
TC k141_26900 k141_26900_17 19737 20708 + 3.A.1.5.3
TC k141_26900 k141_26900_18 20710 21573 + 3.A.1.5.15
TC k141_26900 k141_26900_19 21588 22595 + 3.A.1.5.2
TC k141_26900 k141_26900_20 22599 23549 + 3.A.1.5.15
Gene ID: k141_26900_3
Type: TC
Location: 2142 - 2888 (+)
Gene ID: k141_26900_4
Type: TC
Location: 2885 - 3667 (+)
Gene ID: k141_26900_5
Type: pfam
Location: 3737 - 4528 (+)
Gene ID: k141_26900_6
Type: TC
Location: 4686 - 5783 (+)
Gene ID: k141_26900_7
Type: TC
Location: 5827 - 6606 (+)
Gene ID: k141_26900_8
Type: pfam
Location: 6822 - 7577 (+)
Gene ID: k141_26900_9
Type: TC
Location: 7746 - 9599 (+)
Gene ID: k141_26900_10
Type: CAZyme
Location: 9677 - 11611 (+)
Gene ID: k141_26900_11
Type: TF
Location: 11800 - 13404 (+)
Gene ID: k141_26900_12
Type: TC
Location: 13404 - 14180 (+)
Gene ID: k141_26900_13
Type: pfam
Location: 14170 - 15591 (+)
Gene ID: k141_26900_14
Type: pfam
Location: 15591 - 16820 (+)
Gene ID: k141_26900_15
Type: TC
Location: 16810 - 17766 (+)
Gene ID: k141_26900_16
Type: TC
Location: 17970 - 19649 (+)
Gene ID: k141_26900_17
Type: TC
Location: 19737 - 20708 (+)
Gene ID: k141_26900_18
Type: TC
Location: 20710 - 21573 (+)
Gene ID: k141_26900_19
Type: TC
Location: 21588 - 22595 (+)
Gene ID: k141_26900_20
Type: TC
Location: 22599 - 23549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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