Cluster: CGMR042535_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR042535
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23816 | k141_23816_12 | 10920 | 11990 | + | GT28 |
| STP | k141_23816 | k141_23816_13 | 11981 | 12526 | - | Sigma70_r2 | Sigma70_r4_2 |
| pfam | k141_23816 | k141_23816_14 | 12552 | 12971 | - | HIT | DcpS_C |
| TC | k141_23816 | k141_23816_15 | 12968 | 13585 | - | 9.B.104.1.3 |
Gene ID: k141_23816_12
Type: CAZyme
Location: 10920 - 11990 (+)
Type: CAZyme
Location: 10920 - 11990 (+)
Gene ID: k141_23816_13
Type: STP
Location: 11981 - 12526 (-)
Type: STP
Location: 11981 - 12526 (-)
Gene ID: k141_23816_14
Type: pfam
Location: 12552 - 12971 (-)
Type: pfam
Location: 12552 - 12971 (-)
Gene ID: k141_23816_15
Type: TC
Location: 12968 - 13585 (-)
Type: TC
Location: 12968 - 13585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.