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Cluster: CGMR042535_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54818 k141_54818_16 19943 21343 + 3.B.1.1.6
TF k141_54818 k141_54818_17 21381 22280 - HTH_1
pfam k141_54818 k141_54818_18 22382 23506 + PrpF
TC k141_54818 k141_54818_19 23549 24847 + 2.A.11.1.2
CAZyme k141_54818 k141_54818_20 24884 26638 + CE1
pfam k141_54818 k141_54818_21 26656 28920 + Aconitase
TC k141_54818 k141_54818_22 29058 30026 + 2.A.11.1.2
Gene ID: k141_54818_16
Type: TC
Location: 19943 - 21343 (+)
Gene ID: k141_54818_17
Type: TF
Location: 21381 - 22280 (-)
Gene ID: k141_54818_18
Type: pfam
Location: 22382 - 23506 (+)
Gene ID: k141_54818_19
Type: TC
Location: 23549 - 24847 (+)
Gene ID: k141_54818_20
Type: CAZyme
Location: 24884 - 26638 (+)
Gene ID: k141_54818_21
Type: pfam
Location: 26656 - 28920 (+)
Gene ID: k141_54818_22
Type: TC
Location: 29058 - 30026 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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