Cluster: CGMR042535_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR042535
- CGC Family ID: CGCFAM_03053
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_40691 | k141_40691_21 | 22256 | 22810 | - | 3.A.1.25.2 |
| pfam | k141_40691 | k141_40691_22 | 23184 | 23741 | + | DUF1003 |
| TC | k141_40691 | k141_40691_23 | 23931 | 25289 | + | 2.A.66.1.32 |
| TC | k141_40691 | k141_40691_24 | 25448 | 27085 | - | 3.A.1.121.4 |
| TF | k141_40691 | k141_40691_25 | 27316 | 27528 | - | CSD |
| CAZyme | k141_40691 | k141_40691_26 | 27904 | 29403 | - | GH77 |
Gene ID: k141_40691_21
Type: TC
Location: 22256 - 22810 (-)
Type: TC
Location: 22256 - 22810 (-)
Gene ID: k141_40691_22
Type: pfam
Location: 23184 - 23741 (+)
Type: pfam
Location: 23184 - 23741 (+)
Gene ID: k141_40691_23
Type: TC
Location: 23931 - 25289 (+)
Type: TC
Location: 23931 - 25289 (+)
Gene ID: k141_40691_24
Type: TC
Location: 25448 - 27085 (-)
Type: TC
Location: 25448 - 27085 (-)
Gene ID: k141_40691_25
Type: TF
Location: 27316 - 27528 (-)
Type: TF
Location: 27316 - 27528 (-)
Gene ID: k141_40691_26
Type: CAZyme
Location: 27904 - 29403 (-)
Type: CAZyme
Location: 27904 - 29403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.