Cluster: CGMR042535_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR042535
- CGC Family ID: CGCFAM_07990
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_65308 | k141_65308_68 | 80428 | 81504 | + | 3.A.1.11.8 |
| TC | k141_65308 | k141_65308_69 | 81497 | 82318 | + | 3.A.1.11.8 |
| TC | k141_65308 | k141_65308_70 | 82318 | 84258 | + | 3.A.1.11.7 |
| STP | k141_65308 | k141_65308_71 | 84390 | 85709 | - | ACT |
| peptidase | k141_65308 | k141_65308_72 | 85754 | 86389 | - | S26.UPA |
| CAZyme | k141_65308 | k141_65308_73 | 86696 | 89104 | + | CBM48 | GH13_9 |
Gene ID: k141_65308_68
Type: TC
Location: 80428 - 81504 (+)
Type: TC
Location: 80428 - 81504 (+)
Gene ID: k141_65308_69
Type: TC
Location: 81497 - 82318 (+)
Type: TC
Location: 81497 - 82318 (+)
Gene ID: k141_65308_70
Type: TC
Location: 82318 - 84258 (+)
Type: TC
Location: 82318 - 84258 (+)
Gene ID: k141_65308_71
Type: STP
Location: 84390 - 85709 (-)
Type: STP
Location: 84390 - 85709 (-)
Gene ID: k141_65308_72
Type: peptidase
Location: 85754 - 86389 (-)
Type: peptidase
Location: 85754 - 86389 (-)
Gene ID: k141_65308_73
Type: CAZyme
Location: 86696 - 89104 (+)
Type: CAZyme
Location: 86696 - 89104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.