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Cluster: CGMR042535_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_7009 k141_7009_16 16815 17777 + GT2
CAZyme k141_7009 k141_7009_17 17774 19972 + GT2 | GT2
CAZyme k141_7009 k141_7009_18 19969 20955 + GT2
TC k141_7009 k141_7009_19 21219 22703 + 9.B.18.1.1
pfam k141_7009 k141_7009_20 22720 24489 + LytR_cpsA_psr
pfam k141_7009 k141_7009_21 24872 25792 + PBP_like | PBP_like_2 | SBP_bac_11
TC k141_7009 k141_7009_22 25955 26938 + 3.A.1.7.5
TC k141_7009 k141_7009_23 26942 27820 + 3.A.1.7.5
TC k141_7009 k141_7009_24 27887 28648 + 3.A.1.7.5
Gene ID: k141_7009_16
Type: CAZyme
Location: 16815 - 17777 (+)
Gene ID: k141_7009_17
Type: CAZyme
Location: 17774 - 19972 (+)
Gene ID: k141_7009_18
Type: CAZyme
Location: 19969 - 20955 (+)
Gene ID: k141_7009_19
Type: TC
Location: 21219 - 22703 (+)
Gene ID: k141_7009_20
Type: pfam
Location: 22720 - 24489 (+)
Gene ID: k141_7009_21
Type: pfam
Location: 24872 - 25792 (+)
Gene ID: k141_7009_22
Type: TC
Location: 25955 - 26938 (+)
Gene ID: k141_7009_23
Type: TC
Location: 26942 - 27820 (+)
Gene ID: k141_7009_24
Type: TC
Location: 27887 - 28648 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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