Cluster: CGMR041993_CGC23
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041993
- CGC Family ID: CGCFAM_02150
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13545 | k141_13545_151 | 128227 | 129081 | - | 3.A.1.24.5 |
| TC | k141_13545 | k141_13545_152 | 129123 | 129785 | - | 3.A.1.24.5 |
| TC | k141_13545 | k141_13545_153 | 129775 | 130803 | - | 3.A.1.24.2 |
| TC | k141_13545 | k141_13545_154 | 131009 | 132454 | - | 2.A.25.1.9 |
| pfam | k141_13545 | k141_13545_155 | 132995 | 134893 | - | CN_hydrolase | NAD_synthase |
| CAZyme | k141_13545 | k141_13545_156 | 135223 | 136215 | - | GT2 |
| pfam | k141_13545 | k141_13545_157 | 136315 | 137967 | - | VanW | G5 | PG_binding_4 |
| CAZyme | k141_13545 | k141_13545_158 | 138308 | 139474 | + | GT28 |
| TF | k141_13545 | k141_13545_159 | 139659 | 139889 | - | HTH_3 |
| pfam | k141_13545 | k141_13545_160 | 139899 | 140387 | - | DUF2975 |
| TC | k141_13545 | k141_13545_161 | 140657 | 141325 | - | 3.A.3.1.8 |
| TC | k141_13545 | k141_13545_162 | 141339 | 141992 | - | 3.A.3.1.8 |
| TC | k141_13545 | k141_13545_163 | 141989 | 144889 | - | 3.A.3.1.8 |
Gene ID: k141_13545_151
Type: TC
Location: 128227 - 129081 (-)
Type: TC
Location: 128227 - 129081 (-)
Gene ID: k141_13545_152
Type: TC
Location: 129123 - 129785 (-)
Type: TC
Location: 129123 - 129785 (-)
Gene ID: k141_13545_153
Type: TC
Location: 129775 - 130803 (-)
Type: TC
Location: 129775 - 130803 (-)
Gene ID: k141_13545_154
Type: TC
Location: 131009 - 132454 (-)
Type: TC
Location: 131009 - 132454 (-)
Gene ID: k141_13545_155
Type: pfam
Location: 132995 - 134893 (-)
Type: pfam
Location: 132995 - 134893 (-)
Gene ID: k141_13545_156
Type: CAZyme
Location: 135223 - 136215 (-)
Type: CAZyme
Location: 135223 - 136215 (-)
Gene ID: k141_13545_157
Type: pfam
Location: 136315 - 137967 (-)
Type: pfam
Location: 136315 - 137967 (-)
Gene ID: k141_13545_158
Type: CAZyme
Location: 138308 - 139474 (+)
Type: CAZyme
Location: 138308 - 139474 (+)
Gene ID: k141_13545_159
Type: TF
Location: 139659 - 139889 (-)
Type: TF
Location: 139659 - 139889 (-)
Gene ID: k141_13545_160
Type: pfam
Location: 139899 - 140387 (-)
Type: pfam
Location: 139899 - 140387 (-)
Gene ID: k141_13545_161
Type: TC
Location: 140657 - 141325 (-)
Type: TC
Location: 140657 - 141325 (-)
Gene ID: k141_13545_162
Type: TC
Location: 141339 - 141992 (-)
Type: TC
Location: 141339 - 141992 (-)
Gene ID: k141_13545_163
Type: TC
Location: 141989 - 144889 (-)
Type: TC
Location: 141989 - 144889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Species
Clostridium_E sp023401495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.