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Cluster: CGMR041993_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18929 k141_18929_48 50138 51484 + GH172
TF k141_18929 k141_18929_49 51515 52564 + LacI
STP k141_18929 k141_18929_50 52587 53876 + SBP_bac_1
TC k141_18929 k141_18929_51 53954 54853 + 3.A.1.1.20
TC k141_18929 k141_18929_52 54866 55672 + 3.A.1.1.39
CAZyme k141_18929 k141_18929_53 55699 56829 + GH172
STP k141_18929 k141_18929_54 56905 57912 + PfkB
pfam k141_18929 k141_18929_55 57942 60653 + Bac_rhamnosid6H | MGH1-like_GH
CAZyme k141_18929 k141_18929_56 60678 62348 + GH13_31
Gene ID: k141_18929_48
Type: CAZyme
Location: 50138 - 51484 (+)
Gene ID: k141_18929_49
Type: TF
Location: 51515 - 52564 (+)
Gene ID: k141_18929_50
Type: STP
Location: 52587 - 53876 (+)
Gene ID: k141_18929_51
Type: TC
Location: 53954 - 54853 (+)
Gene ID: k141_18929_52
Type: TC
Location: 54866 - 55672 (+)
Gene ID: k141_18929_53
Type: CAZyme
Location: 55699 - 56829 (+)
Gene ID: k141_18929_54
Type: STP
Location: 56905 - 57912 (+)
Gene ID: k141_18929_55
Type: pfam
Location: 57942 - 60653 (+)
Gene ID: k141_18929_56
Type: CAZyme
Location: 60678 - 62348 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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