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Cluster: CGMR041993_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23491 k141_23491_574 592348 593703 + 3.A.1.1.45
TC k141_23491 k141_23491_575 593837 594679 + 3.A.1.1.45
TC k141_23491 k141_23491_576 594679 595515 + 3.A.1.1.45
TF k141_23491 k141_23491_577 595552 596598 + LacI
CAZyme k141_23491 k141_23491_578 596600 598102 + GH77
CAZyme k141_23491 k141_23491_579 598208 600547 + GT35
NULL(UNKNOWN) k141_23491 k141_23491_580 600968 601528 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_23491 k141_23491_581 601677 602513 - HTH_6
TC k141_23491 k141_23491_582 602780 604000 + 2.A.27.1.1
Gene ID: k141_23491_574
Type: TC
Location: 592348 - 593703 (+)
Gene ID: k141_23491_575
Type: TC
Location: 593837 - 594679 (+)
Gene ID: k141_23491_576
Type: TC
Location: 594679 - 595515 (+)
Gene ID: k141_23491_577
Type: TF
Location: 595552 - 596598 (+)
Gene ID: k141_23491_578
Type: CAZyme
Location: 596600 - 598102 (+)
Gene ID: k141_23491_579
Type: CAZyme
Location: 598208 - 600547 (+)
Gene ID: k141_23491_580
Type:
Location: 600968 - 601528 (+)
Gene ID: k141_23491_581
Type: TF
Location: 601677 - 602513 (-)
Gene ID: k141_23491_582
Type: TC
Location: 602780 - 604000 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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