Cluster: CGMR041908_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041908
- CGC Family ID: CGCFAM_01525
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_182166 | k141_182166_2 | 752 | 1720 | + | 3.A.1.1.10 |
| TC | k141_182166 | k141_182166_3 | 1736 | 2578 | + | 3.A.1.1.29 |
| CAZyme | k141_182166 | k141_182166_4 | 2605 | 3291 | + | CE12 |
| pfam | k141_182166 | k141_182166_5 | 3417 | 4223 | + | Glyco_hydro_88 |
| CAZyme | k141_182166 | k141_182166_6 | 4237 | 5796 | + | GH28 |
Gene ID: k141_182166_2
Type: TC
Location: 752 - 1720 (+)
Type: TC
Location: 752 - 1720 (+)
Gene ID: k141_182166_3
Type: TC
Location: 1736 - 2578 (+)
Type: TC
Location: 1736 - 2578 (+)
Gene ID: k141_182166_4
Type: CAZyme
Location: 2605 - 3291 (+)
Type: CAZyme
Location: 2605 - 3291 (+)
Gene ID: k141_182166_5
Type: pfam
Location: 3417 - 4223 (+)
Type: pfam
Location: 3417 - 4223 (+)
Gene ID: k141_182166_6
Type: CAZyme
Location: 4237 - 5796 (+)
Type: CAZyme
Location: 4237 - 5796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.