Cluster: CGMR041908_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR041908
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_207108 | k141_207108_10 | 10379 | 11350 | - | GT2 |
| pfam | k141_207108 | k141_207108_11 | 11376 | 12971 | - | Glucos_trans_II |
| pfam | k141_207108 | k141_207108_12 | 13000 | 13875 | - | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | k141_207108 | k141_207108_13 | 14024 | 14287 | - | 8.A.8.1.6 |
Gene ID: k141_207108_10
Type: CAZyme
Location: 10379 - 11350 (-)
Type: CAZyme
Location: 10379 - 11350 (-)
Gene ID: k141_207108_11
Type: pfam
Location: 11376 - 12971 (-)
Type: pfam
Location: 11376 - 12971 (-)
Gene ID: k141_207108_12
Type: pfam
Location: 13000 - 13875 (-)
Type: pfam
Location: 13000 - 13875 (-)
Gene ID: k141_207108_13
Type: TC
Location: 14024 - 14287 (-)
Type: TC
Location: 14024 - 14287 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.