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Cluster: CGMR041908_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_136544 k141_136544_9 10903 12849 + 3.A.1.120.6
pfam k141_136544 k141_136544_10 12877 13314 - ThrE | ThrE_2
TC k141_136544 k141_136544_11 13314 14090 - 2.A.79.1.4
NULL(UNKNOWN) k141_136544 k141_136544_12 14270 14437 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_136544 k141_136544_13 14428 15081 + 9.A.11.1.1
pfam k141_136544 k141_136544_14 15071 15496 + SpoVAB
pfam k141_136544 k141_136544_15 15692 16021 + DUF3837
CAZyme k141_136544 k141_136544_16 16208 18472 + GH2
pfam k141_136544 k141_136544_17 18610 19083 - Sod_Cu
TF k141_136544 k141_136544_18 19147 20352 - HTH_AraC | HTH_AraC
TC k141_136544 k141_136544_19 20707 21174 + 9.A.11.1.1
Gene ID: k141_136544_9
Type: TC
Location: 10903 - 12849 (+)
Gene ID: k141_136544_10
Type: pfam
Location: 12877 - 13314 (-)
Gene ID: k141_136544_11
Type: TC
Location: 13314 - 14090 (-)
Gene ID: k141_136544_12
Type:
Location: 14270 - 14437 (+)
Gene ID: k141_136544_13
Type: TC
Location: 14428 - 15081 (+)
Gene ID: k141_136544_14
Type: pfam
Location: 15071 - 15496 (+)
Gene ID: k141_136544_15
Type: pfam
Location: 15692 - 16021 (+)
Gene ID: k141_136544_16
Type: CAZyme
Location: 16208 - 18472 (+)
Gene ID: k141_136544_17
Type: pfam
Location: 18610 - 19083 (-)
Gene ID: k141_136544_18
Type: TF
Location: 19147 - 20352 (-)
Gene ID: k141_136544_19
Type: TC
Location: 20707 - 21174 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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