Cluster: CGMR041908_CGC46
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041908
- CGC Family ID: CGCFAM_00203
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_276419 | k141_276419_7 | 7593 | 8756 | - | GH53 |
| CAZyme | k141_276419 | k141_276419_8 | 8776 | 11799 | - | GH2 |
| TC | k141_276419 | k141_276419_9 | 11890 | 12720 | - | 3.A.1.1.4 |
| TC | k141_276419 | k141_276419_10 | 12713 | 13615 | - | 3.A.1.1.4 |
Gene ID: k141_276419_7
Type: CAZyme
Location: 7593 - 8756 (-)
Type: CAZyme
Location: 7593 - 8756 (-)
Gene ID: k141_276419_8
Type: CAZyme
Location: 8776 - 11799 (-)
Type: CAZyme
Location: 8776 - 11799 (-)
Gene ID: k141_276419_9
Type: TC
Location: 11890 - 12720 (-)
Type: TC
Location: 11890 - 12720 (-)
Gene ID: k141_276419_10
Type: TC
Location: 12713 - 13615 (-)
Type: TC
Location: 12713 - 13615 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_276419_7 | vegetarian > omnivore | 1.16349 | 0.02258 |