Cluster: CGMR041908_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041908
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_122302 | k141_122302_16 | 17286 | 18206 | - | 9.B.102.7.10 |
| CAZyme | k141_122302 | k141_122302_17 | 18187 | 19146 | - | GT2 |
| pfam | k141_122302 | k141_122302_18 | 19161 | 21521 | - | Laminin_G_3 |
| CAZyme | k141_122302 | k141_122302_19 | 21548 | 23611 | - | GT4 |
Gene ID: k141_122302_16
Type: TC
Location: 17286 - 18206 (-)
Type: TC
Location: 17286 - 18206 (-)
Gene ID: k141_122302_17
Type: CAZyme
Location: 18187 - 19146 (-)
Type: CAZyme
Location: 18187 - 19146 (-)
Gene ID: k141_122302_18
Type: pfam
Location: 19161 - 21521 (-)
Type: pfam
Location: 19161 - 21521 (-)
Gene ID: k141_122302_19
Type: CAZyme
Location: 21548 - 23611 (-)
Type: CAZyme
Location: 21548 - 23611 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.