Cluster: CGMR041908_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR041908
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_67712 | k141_67712_19 | 23528 | 25279 | + | CBM34 | GH13_20 |
| STP | k141_67712 | k141_67712_20 | 25404 | 26531 | + | SBP_bac_3 |
| pfam | k141_67712 | k141_67712_21 | 26521 | 27285 | + | BPD_transp_1 |
| TC | k141_67712 | k141_67712_22 | 27513 | 28091 | + | 3.A.1.17.3 |
Gene ID: k141_67712_19
Type: CAZyme
Location: 23528 - 25279 (+)
Type: CAZyme
Location: 23528 - 25279 (+)
Gene ID: k141_67712_20
Type: STP
Location: 25404 - 26531 (+)
Type: STP
Location: 25404 - 26531 (+)
Gene ID: k141_67712_21
Type: pfam
Location: 26521 - 27285 (+)
Type: pfam
Location: 26521 - 27285 (+)
Gene ID: k141_67712_22
Type: TC
Location: 27513 - 28091 (+)
Type: TC
Location: 27513 - 28091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.