Cluster: CGMR041908_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR041908
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_270678 | k141_270678_30 | 25503 | 26255 | - | GH43_12 |
| pfam | k141_270678 | k141_270678_31 | 26272 | 26973 | - | DUF434 | DUF5616 |
| STP | k141_270678 | k141_270678_32 | 27248 | 27826 | + | TetR_N |
| TC | k141_270678 | k141_270678_33 | 27891 | 29438 | - | 4.C.1.1.4 |
Gene ID: k141_270678_30
Type: CAZyme
Location: 25503 - 26255 (-)
Type: CAZyme
Location: 25503 - 26255 (-)
Gene ID: k141_270678_31
Type: pfam
Location: 26272 - 26973 (-)
Type: pfam
Location: 26272 - 26973 (-)
Gene ID: k141_270678_32
Type: STP
Location: 27248 - 27826 (+)
Type: STP
Location: 27248 - 27826 (+)
Gene ID: k141_270678_33
Type: TC
Location: 27891 - 29438 (-)
Type: TC
Location: 27891 - 29438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.