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Cluster: CGMR041908_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_93070 k141_93070_10 6264 6794 + 8.A.5.1.4
pfam k141_93070 k141_93070_11 6791 7141 + Aldo_ket_red
CAZyme k141_93070 k141_93070_12 7267 9681 + GH94
CAZyme k141_93070 k141_93070_13 9700 12405 + GH94
TF k141_93070 k141_93070_14 12430 13167 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_93070 k141_93070_15 13303 14715 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_93070 k141_93070_16 14778 15692 + 3.A.1.1.4
TC k141_93070 k141_93070_17 15711 16568 + 3.A.1.1.13
TC k141_93070 k141_93070_18 16584 18317 + 1.B.52.2.2
CAZyme k141_93070 k141_93070_19 18344 22162 + CBM4 | CBM4 | CBM4 | GH16_3
Gene ID: k141_93070_10
Type: TC
Location: 6264 - 6794 (+)
Gene ID: k141_93070_11
Type: pfam
Location: 6791 - 7141 (+)
Gene ID: k141_93070_12
Type: CAZyme
Location: 7267 - 9681 (+)
Gene ID: k141_93070_13
Type: CAZyme
Location: 9700 - 12405 (+)
Gene ID: k141_93070_14
Type: TF
Location: 12430 - 13167 (-)
Gene ID: k141_93070_15
Type:
Location: 13303 - 14715 (+)
Gene ID: k141_93070_16
Type: TC
Location: 14778 - 15692 (+)
Gene ID: k141_93070_17
Type: TC
Location: 15711 - 16568 (+)
Gene ID: k141_93070_18
Type: TC
Location: 16584 - 18317 (+)
Gene ID: k141_93070_19
Type: CAZyme
Location: 18344 - 22162 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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