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Cluster: CGMR041908_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_128898 k141_128898_17 19802 21352 + 3.A.1.106.2
TC k141_128898 k141_128898_18 21686 23239 + 3.A.1.121.1
CAZyme k141_128898 k141_128898_19 23467 25191 - GH53
TC k141_128898 k141_128898_20 25243 26607 - 2.A.66.1.12
TF k141_128898 k141_128898_21 26767 27672 + HTH_AraC | HTH_AraC
pfam k141_128898 k141_128898_22 27680 28531 - Arginase
TC k141_128898 k141_128898_23 28747 30312 - 1.B.52.2.1
pfam k141_128898 k141_128898_24 30490 31677 + HATPase_c_5
TF k141_128898 k141_128898_25 31700 32404 + LytTR
TC k141_128898 k141_128898_26 32655 33971 + 9.A.40.2.1
TC k141_128898 k141_128898_27 34100 35446 + 2.A.38.4.1
TC k141_128898 k141_128898_28 35516 36163 + 2.A.38.4.6
Gene ID: k141_128898_17
Type: TC
Location: 19802 - 21352 (+)
Gene ID: k141_128898_18
Type: TC
Location: 21686 - 23239 (+)
Gene ID: k141_128898_19
Type: CAZyme
Location: 23467 - 25191 (-)
Gene ID: k141_128898_20
Type: TC
Location: 25243 - 26607 (-)
Gene ID: k141_128898_21
Type: TF
Location: 26767 - 27672 (+)
Gene ID: k141_128898_22
Type: pfam
Location: 27680 - 28531 (-)
Gene ID: k141_128898_23
Type: TC
Location: 28747 - 30312 (-)
Gene ID: k141_128898_24
Type: pfam
Location: 30490 - 31677 (+)
Gene ID: k141_128898_25
Type: TF
Location: 31700 - 32404 (+)
Gene ID: k141_128898_26
Type: TC
Location: 32655 - 33971 (+)
Gene ID: k141_128898_27
Type: TC
Location: 34100 - 35446 (+)
Gene ID: k141_128898_28
Type: TC
Location: 35516 - 36163 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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