Cluster: CGMR041908_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR041908
- CGC Family ID: CGCFAM_08589
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_16711 | k141_16711_2 | 1047 | 2489 | + | GT5 |
| pfam | k141_16711 | k141_16711_3 | 2529 | 3428 | - | DUF5688 |
| TC | k141_16711 | k141_16711_4 | 3949 | 5124 | + | 3.A.1.2.17 |
| TC | k141_16711 | k141_16711_5 | 5317 | 6849 | + | 3.A.1.2.17 |
| TC | k141_16711 | k141_16711_6 | 6851 | 7948 | + | 3.A.1.2.12 |
| TC | k141_16711 | k141_16711_7 | 7948 | 8901 | + | 3.A.1.2.17 |
Gene ID: k141_16711_2
Type: CAZyme
Location: 1047 - 2489 (+)
Type: CAZyme
Location: 1047 - 2489 (+)
Gene ID: k141_16711_3
Type: pfam
Location: 2529 - 3428 (-)
Type: pfam
Location: 2529 - 3428 (-)
Gene ID: k141_16711_4
Type: TC
Location: 3949 - 5124 (+)
Type: TC
Location: 3949 - 5124 (+)
Gene ID: k141_16711_5
Type: TC
Location: 5317 - 6849 (+)
Type: TC
Location: 5317 - 6849 (+)
Gene ID: k141_16711_6
Type: TC
Location: 6851 - 7948 (+)
Type: TC
Location: 6851 - 7948 (+)
Gene ID: k141_16711_7
Type: TC
Location: 7948 - 8901 (+)
Type: TC
Location: 7948 - 8901 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.