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Cluster: CGMR041908_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_152941 k141_152941_16 17742 19190 + 3.A.1.1.45
TC k141_152941 k141_152941_17 19289 20131 + 3.A.1.1.45
TC k141_152941 k141_152941_18 20131 20997 + 3.A.1.1.45
TF k141_152941 k141_152941_19 21200 22207 + LacI
CAZyme k141_152941 k141_152941_20 22233 23813 + GH77
Gene ID: k141_152941_16
Type: TC
Location: 17742 - 19190 (+)
Gene ID: k141_152941_17
Type: TC
Location: 19289 - 20131 (+)
Gene ID: k141_152941_18
Type: TC
Location: 20131 - 20997 (+)
Gene ID: k141_152941_19
Type: TF
Location: 21200 - 22207 (+)
Gene ID: k141_152941_20
Type: CAZyme
Location: 22233 - 23813 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_152941_18 vegetarian > omnivore 1.11633 0.02258
k141_152941_18 vegetarian > vegan 1.46998 0.00385

🧭 Explore Read Mapping of CGC

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