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Cluster: CGMR041908_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_234004 k141_234004_1 1 1386 + 3.A.1.1.44
TC k141_234004 k141_234004_2 1495 2502 + 3.A.1.1.28
TC k141_234004 k141_234004_3 2506 3378 + 3.A.1.1.47
pfam k141_234004 k141_234004_4 3400 4614 + GlcNAc_2-epim
CAZyme k141_234004 k141_234004_5 4652 5830 + GH130_1
CAZyme k141_234004 k141_234004_6 5863 6885 + GH130_2
CAZyme k141_234004 k141_234004_7 7048 8073 + CE2
CAZyme k141_234004 k141_234004_8 8197 9324 + CBM35inCE17 | CE17
CAZyme k141_234004 k141_234004_9 9396 11711 + GH1
CAZyme k141_234004 k141_234004_10 11841 13136 + GH3
Gene ID: k141_234004_1
Type: TC
Location: 1 - 1386 (+)
Gene ID: k141_234004_2
Type: TC
Location: 1495 - 2502 (+)
Gene ID: k141_234004_3
Type: TC
Location: 2506 - 3378 (+)
Gene ID: k141_234004_4
Type: pfam
Location: 3400 - 4614 (+)
Gene ID: k141_234004_5
Type: CAZyme
Location: 4652 - 5830 (+)
Gene ID: k141_234004_6
Type: CAZyme
Location: 5863 - 6885 (+)
Gene ID: k141_234004_7
Type: CAZyme
Location: 7048 - 8073 (+)
Gene ID: k141_234004_8
Type: CAZyme
Location: 8197 - 9324 (+)
Gene ID: k141_234004_9
Type: CAZyme
Location: 9396 - 11711 (+)
Gene ID: k141_234004_10
Type: CAZyme
Location: 11841 - 13136 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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