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Cluster: CGMR041908_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_183759 k141_183759_18 16200 16922 - 3.A.1.6.5
NULL(UNKNOWN) k141_183759 k141_183759_19 16941 17438 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_183759 k141_183759_20 17640 19682 + GH133
NULL(UNKNOWN) k141_183759 k141_183759_21 20158 20808 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_183759 k141_183759_22 20822 22669 - GH13_36
TC k141_183759 k141_183759_23 23037 23909 - 3.A.1.1.27
TC k141_183759 k141_183759_24 23909 25282 - 3.A.1.1.27
pfam k141_183759 k141_183759_25 25382 26701 - SBP_bac_8
CAZyme k141_183759 k141_183759_26 26785 28281 - GH77
Gene ID: k141_183759_18
Type: TC
Location: 16200 - 16922 (-)
Gene ID: k141_183759_19
Type:
Location: 16941 - 17438 (-)
Gene ID: k141_183759_20
Type: CAZyme
Location: 17640 - 19682 (+)
Gene ID: k141_183759_21
Type:
Location: 20158 - 20808 (+)
Gene ID: k141_183759_22
Type: CAZyme
Location: 20822 - 22669 (-)
Gene ID: k141_183759_23
Type: TC
Location: 23037 - 23909 (-)
Gene ID: k141_183759_24
Type: TC
Location: 23909 - 25282 (-)
Gene ID: k141_183759_25
Type: pfam
Location: 25382 - 26701 (-)
Gene ID: k141_183759_26
Type: CAZyme
Location: 26785 - 28281 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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