Cluster: CGMR041908_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041908
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_275494 | k141_275494_10 | 9976 | 12138 | - | GH36 |
| CAZyme | k141_275494 | k141_275494_11 | 12151 | 14094 | - | GH127 |
| pfam | k141_275494 | k141_275494_12 | 14087 | 14740 | - | DUF624 |
| TC | k141_275494 | k141_275494_13 | 14817 | 15686 | - | 3.A.1.1.34 |
| TC | k141_275494 | k141_275494_14 | 15700 | 16611 | - | 3.A.1.1.20 |
Gene ID: k141_275494_10
Type: CAZyme
Location: 9976 - 12138 (-)
Type: CAZyme
Location: 9976 - 12138 (-)
Gene ID: k141_275494_11
Type: CAZyme
Location: 12151 - 14094 (-)
Type: CAZyme
Location: 12151 - 14094 (-)
Gene ID: k141_275494_12
Type: pfam
Location: 14087 - 14740 (-)
Type: pfam
Location: 14087 - 14740 (-)
Gene ID: k141_275494_13
Type: TC
Location: 14817 - 15686 (-)
Type: TC
Location: 14817 - 15686 (-)
Gene ID: k141_275494_14
Type: TC
Location: 15700 - 16611 (-)
Type: TC
Location: 15700 - 16611 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.