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Cluster: CGMR041908_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16088 k141_16088_2 2100 3068 - GT2
CAZyme k141_16088 k141_16088_3 3037 4302 - GT4
CAZyme k141_16088 k141_16088_4 4312 5049 - GT2
pfam k141_16088 k141_16088_5 5150 6055 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
TC k141_16088 k141_16088_6 6062 6685 - 9.B.18.1.2
NULL(UNKNOWN) k141_16088 k141_16088_7 6682 7266 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_16088 k141_16088_8 7274 8563 - DUF2813 | AAA_15 | AAA_21
TC k141_16088 k141_16088_9 8553 10451 - 9.B.18.2.1
CAZyme k141_16088 k141_16088_10 10545 14408 - GH73
Gene ID: k141_16088_2
Type: CAZyme
Location: 2100 - 3068 (-)
Gene ID: k141_16088_3
Type: CAZyme
Location: 3037 - 4302 (-)
Gene ID: k141_16088_4
Type: CAZyme
Location: 4312 - 5049 (-)
Gene ID: k141_16088_5
Type: pfam
Location: 5150 - 6055 (-)
Gene ID: k141_16088_6
Type: TC
Location: 6062 - 6685 (-)
Gene ID: k141_16088_7
Type:
Location: 6682 - 7266 (-)
Gene ID: k141_16088_8
Type: pfam
Location: 7274 - 8563 (-)
Gene ID: k141_16088_9
Type: TC
Location: 8553 - 10451 (-)
Gene ID: k141_16088_10
Type: CAZyme
Location: 10545 - 14408 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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