Cluster: CGMR041908_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041908
- CGC Family ID: CGCFAM_04189
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_118106 | k141_118106_53 | 56300 | 56848 | + | CBM61 |
| CAZyme | k141_118106 | k141_118106_54 | 56851 | 57924 | + | GH53 |
| TC | k141_118106 | k141_118106_55 | 57937 | 59139 | + | 3.A.1.1.2 |
| TC | k141_118106 | k141_118106_56 | 59147 | 60058 | + | 3.A.1.1.22 |
| TC | k141_118106 | k141_118106_57 | 60062 | 60886 | + | 3.A.1.1.26 |
| TC | k141_118106 | k141_118106_58 | 61129 | 62526 | + | 1.B.52.2.1 |
Gene ID: k141_118106_53
Type: CAZyme
Location: 56300 - 56848 (+)
Type: CAZyme
Location: 56300 - 56848 (+)
Gene ID: k141_118106_54
Type: CAZyme
Location: 56851 - 57924 (+)
Type: CAZyme
Location: 56851 - 57924 (+)
Gene ID: k141_118106_55
Type: TC
Location: 57937 - 59139 (+)
Type: TC
Location: 57937 - 59139 (+)
Gene ID: k141_118106_56
Type: TC
Location: 59147 - 60058 (+)
Type: TC
Location: 59147 - 60058 (+)
Gene ID: k141_118106_57
Type: TC
Location: 60062 - 60886 (+)
Type: TC
Location: 60062 - 60886 (+)
Gene ID: k141_118106_58
Type: TC
Location: 61129 - 62526 (+)
Type: TC
Location: 61129 - 62526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.