Cluster: CGMR041631_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR041631
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_313627 | k141_313627_24 | 27574 | 28329 | + | 9.B.115.1.6 |
| STP | k141_313627 | k141_313627_25 | 28583 | 29830 | - | EPSP_synthase |
| TC | k141_313627 | k141_313627_26 | 30006 | 30728 | - | 1.B.42.1.2 |
| STP | k141_313627 | k141_313627_27 | 30815 | 31783 | - | CBS | CBS | SIS |
| TC | k141_313627 | k141_313627_28 | 31888 | 34080 | + | 2.A.16.2.2 |
| CAZyme | k141_313627 | k141_313627_29 | 34099 | 35073 | + | GT90 |
Gene ID: k141_313627_24
Type: TC
Location: 27574 - 28329 (+)
Type: TC
Location: 27574 - 28329 (+)
Gene ID: k141_313627_25
Type: STP
Location: 28583 - 29830 (-)
Type: STP
Location: 28583 - 29830 (-)
Gene ID: k141_313627_26
Type: TC
Location: 30006 - 30728 (-)
Type: TC
Location: 30006 - 30728 (-)
Gene ID: k141_313627_27
Type: STP
Location: 30815 - 31783 (-)
Type: STP
Location: 30815 - 31783 (-)
Gene ID: k141_313627_28
Type: TC
Location: 31888 - 34080 (+)
Type: TC
Location: 31888 - 34080 (+)
Gene ID: k141_313627_29
Type: CAZyme
Location: 34099 - 35073 (+)
Type: CAZyme
Location: 34099 - 35073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_313627_26 | omnivore > vegan | 1.21066 | 0.03187 |
| k141_313627_26 | vegetarian > vegan | 1.08915 | 0.02059 |