Cluster: CGMR041631_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR041631
- CGC Family ID: CGCFAM_00489
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_166376 | k141_166376_10 | 11686 | 12561 | + | GT8 |
| CAZyme | k141_166376 | k141_166376_11 | 12564 | 13541 | + | GT2 |
| CAZyme | k141_166376 | k141_166376_12 | 13555 | 14532 | + | GT2 |
| CAZyme | k141_166376 | k141_166376_13 | 14540 | 15517 | + | GT2 |
| CAZyme | k141_166376 | k141_166376_14 | 15517 | 16485 | + | GT2 |
| CAZyme | k141_166376 | k141_166376_15 | 16494 | 17627 | + | GT4 |
| pfam | k141_166376 | k141_166376_16 | 17764 | 18345 | - | DUF6794 |
| TC | k141_166376 | k141_166376_17 | 18673 | 19509 | + | 1.B.14.6.2 |
Gene ID: k141_166376_10
Type: CAZyme
Location: 11686 - 12561 (+)
Type: CAZyme
Location: 11686 - 12561 (+)
Gene ID: k141_166376_11
Type: CAZyme
Location: 12564 - 13541 (+)
Type: CAZyme
Location: 12564 - 13541 (+)
Gene ID: k141_166376_12
Type: CAZyme
Location: 13555 - 14532 (+)
Type: CAZyme
Location: 13555 - 14532 (+)
Gene ID: k141_166376_13
Type: CAZyme
Location: 14540 - 15517 (+)
Type: CAZyme
Location: 14540 - 15517 (+)
Gene ID: k141_166376_14
Type: CAZyme
Location: 15517 - 16485 (+)
Type: CAZyme
Location: 15517 - 16485 (+)
Gene ID: k141_166376_15
Type: CAZyme
Location: 16494 - 17627 (+)
Type: CAZyme
Location: 16494 - 17627 (+)
Gene ID: k141_166376_16
Type: pfam
Location: 17764 - 18345 (-)
Type: pfam
Location: 17764 - 18345 (-)
Gene ID: k141_166376_17
Type: TC
Location: 18673 - 19509 (+)
Type: TC
Location: 18673 - 19509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.