Cluster: CGMR041631_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR041631
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_92075 | k141_92075_13 | 17634 | 18881 | + | 9.B.146.1.6 |
| pfam | k141_92075 | k141_92075_14 | 18889 | 20223 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_92075 | k141_92075_15 | 20544 | 21824 | + | 2.A.103.1.3 |
| CAZyme | k141_92075 | k141_92075_16 | 22021 | 23130 | + | GT28 |
| pfam | k141_92075 | k141_92075_17 | 23245 | 24624 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| NULL(UNKNOWN) | k141_92075 | k141_92075_18 | 24713 | 25648 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_92075 | k141_92075_19 | 25734 | 27149 | + | 9.B.157.1.3 |
Gene ID: k141_92075_13
Type: TC
Location: 17634 - 18881 (+)
Type: TC
Location: 17634 - 18881 (+)
Gene ID: k141_92075_14
Type: pfam
Location: 18889 - 20223 (+)
Type: pfam
Location: 18889 - 20223 (+)
Gene ID: k141_92075_15
Type: TC
Location: 20544 - 21824 (+)
Type: TC
Location: 20544 - 21824 (+)
Gene ID: k141_92075_16
Type: CAZyme
Location: 22021 - 23130 (+)
Type: CAZyme
Location: 22021 - 23130 (+)
Gene ID: k141_92075_17
Type: pfam
Location: 23245 - 24624 (+)
Type: pfam
Location: 23245 - 24624 (+)
Gene ID: k141_92075_18
Type:
Location: 24713 - 25648 (+)
Type:
Location: 24713 - 25648 (+)
Gene ID: k141_92075_19
Type: TC
Location: 25734 - 27149 (+)
Type: TC
Location: 25734 - 27149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.