Cluster: CGMR041631_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR041631
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_265236 | k141_265236_22 | 24008 | 26476 | + | 1.B.14.3.6 |
| pfam | k141_265236 | k141_265236_23 | 26542 | 27930 | + | DUF4374 |
| pfam | k141_265236 | k141_265236_24 | 28024 | 29169 | + | PepSY_TM |
| CAZyme | k141_265236 | k141_265236_25 | 29584 | 31866 | - | GH2 |
| STP | k141_265236 | k141_265236_26 | 32134 | 32646 | - | Response_reg |
| STP | k141_265236 | k141_265236_27 | 32833 | 35328 | - | GAF | HisKA | PAS |
| CAZyme | k141_265236 | k141_265236_28 | 35528 | 37795 | + | PL8_3 |
| pfam | k141_265236 | k141_265236_29 | 38201 | 39145 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| NULL(UNKNOWN) | k141_265236 | k141_265236_30 | 39177 | 39470 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_265236 | k141_265236_31 | 39665 | 40678 | - | 2.A.4.7.7 |
| CAZyme | k141_265236 | k141_265236_32 | 40758 | 42743 | - | PL8_3 |
Gene ID: k141_265236_22
Type: TC
Location: 24008 - 26476 (+)
Type: TC
Location: 24008 - 26476 (+)
Gene ID: k141_265236_23
Type: pfam
Location: 26542 - 27930 (+)
Type: pfam
Location: 26542 - 27930 (+)
Gene ID: k141_265236_24
Type: pfam
Location: 28024 - 29169 (+)
Type: pfam
Location: 28024 - 29169 (+)
Gene ID: k141_265236_25
Type: CAZyme
Location: 29584 - 31866 (-)
Type: CAZyme
Location: 29584 - 31866 (-)
Gene ID: k141_265236_26
Type: STP
Location: 32134 - 32646 (-)
Type: STP
Location: 32134 - 32646 (-)
Gene ID: k141_265236_27
Type: STP
Location: 32833 - 35328 (-)
Type: STP
Location: 32833 - 35328 (-)
Gene ID: k141_265236_28
Type: CAZyme
Location: 35528 - 37795 (+)
Type: CAZyme
Location: 35528 - 37795 (+)
Gene ID: k141_265236_29
Type: pfam
Location: 38201 - 39145 (-)
Type: pfam
Location: 38201 - 39145 (-)
Gene ID: k141_265236_30
Type:
Location: 39177 - 39470 (-)
Type:
Location: 39177 - 39470 (-)
Gene ID: k141_265236_31
Type: TC
Location: 39665 - 40678 (-)
Type: TC
Location: 39665 - 40678 (-)
Gene ID: k141_265236_32
Type: CAZyme
Location: 40758 - 42743 (-)
Type: CAZyme
Location: 40758 - 42743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.