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Cluster: CGMR041270_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54100 k141_54100_62 72878 74152 + 3.A.1.1.24
TC k141_54100 k141_54100_63 74169 75056 + 3.A.1.1.28
TC k141_54100 k141_54100_64 75053 75895 + 3.A.1.1.28
CAZyme k141_54100 k141_54100_65 75939 77612 + GH13_31
NULL(UNKNOWN) k141_54100 k141_54100_66 77805 78083 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_54100 k141_54100_67 78315 79379 + FUSC_2
TC k141_54100 k141_54100_68 80111 80746 + 2.A.87.1.4
pfam k141_54100 k141_54100_69 81075 82064 + Mem_trans
TC k141_54100 k141_54100_70 82407 83189 + 2.A.5.5.2
Gene ID: k141_54100_62
Type: TC
Location: 72878 - 74152 (+)
Gene ID: k141_54100_63
Type: TC
Location: 74169 - 75056 (+)
Gene ID: k141_54100_64
Type: TC
Location: 75053 - 75895 (+)
Gene ID: k141_54100_65
Type: CAZyme
Location: 75939 - 77612 (+)
Gene ID: k141_54100_66
Type:
Location: 77805 - 78083 (+)
Gene ID: k141_54100_67
Type: pfam
Location: 78315 - 79379 (+)
Gene ID: k141_54100_68
Type: TC
Location: 80111 - 80746 (+)
Gene ID: k141_54100_69
Type: pfam
Location: 81075 - 82064 (+)
Gene ID: k141_54100_70
Type: TC
Location: 82407 - 83189 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_54100_62 vegan > omnivore 1.50388 0.00604
k141_54100_63 vegan > omnivore 1.79815 0.00604
k141_54100_63 vegetarian > omnivore 1.24933 0.04011
k141_54100_64 vegan > omnivore 1.44405 0.00604
k141_54100_64 vegetarian > omnivore 1.45487 0.04179

🧭 Explore Read Mapping of CGC

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