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Cluster: CGMR041270_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54100 k141_54100_41 48335 49195 + 1.A.23.2.2
TC k141_54100 k141_54100_42 49528 51138 + 3.A.1.5.11
TC k141_54100 k141_54100_43 51351 52271 + 3.A.1.5.11
TC k141_54100 k141_54100_44 52285 53184 + 3.A.1.5.11
TC k141_54100 k141_54100_45 53197 54186 + 3.A.1.5.20
TC k141_54100 k141_54100_46 54190 55164 + 3.A.1.5.20
TF k141_54100 k141_54100_47 55245 56027 + HTH_DeoR
TC k141_54100 k141_54100_48 56125 56871 + 9.B.158.1.1
pfam k141_54100 k141_54100_49 56871 59372 + Transglut_core
CAZyme k141_54100 k141_54100_50 59397 60707 + GH29
NULL(UNKNOWN) k141_54100 k141_54100_51 60928 61446 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_54100 k141_54100_52 61690 62385 + TP_methylase
TC k141_54100 k141_54100_53 62382 63224 + 3.A.1.105.12
Gene ID: k141_54100_41
Type: TC
Location: 48335 - 49195 (+)
Gene ID: k141_54100_42
Type: TC
Location: 49528 - 51138 (+)
Gene ID: k141_54100_43
Type: TC
Location: 51351 - 52271 (+)
Gene ID: k141_54100_44
Type: TC
Location: 52285 - 53184 (+)
Gene ID: k141_54100_45
Type: TC
Location: 53197 - 54186 (+)
Gene ID: k141_54100_46
Type: TC
Location: 54190 - 55164 (+)
Gene ID: k141_54100_47
Type: TF
Location: 55245 - 56027 (+)
Gene ID: k141_54100_48
Type: TC
Location: 56125 - 56871 (+)
Gene ID: k141_54100_49
Type: pfam
Location: 56871 - 59372 (+)
Gene ID: k141_54100_50
Type: CAZyme
Location: 59397 - 60707 (+)
Gene ID: k141_54100_51
Type:
Location: 60928 - 61446 (-)
Gene ID: k141_54100_52
Type: pfam
Location: 61690 - 62385 (+)
Gene ID: k141_54100_53
Type: TC
Location: 62382 - 63224 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_54100_53 vegan > omnivore 1.22194 0.00604

🧭 Explore Read Mapping of CGC

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