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Cluster: CGMR041270_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55295 k141_55295_5 4077 5450 + 3.A.1.1.27
TC k141_55295 k141_55295_6 5453 6325 + 3.A.1.1.27
CAZyme k141_55295 k141_55295_7 6334 8283 + GH13_14
CAZyme k141_55295 k141_55295_8 8304 10256 + GH133
CAZyme k141_55295 k141_55295_9 10261 12015 + CBM34 | GH13_20
CAZyme k141_55295 k141_55295_10 12088 13725 + GH13_31
CAZyme k141_55295 k141_55295_11 13801 15282 + GH77
Gene ID: k141_55295_5
Type: TC
Location: 4077 - 5450 (+)
Gene ID: k141_55295_6
Type: TC
Location: 5453 - 6325 (+)
Gene ID: k141_55295_7
Type: CAZyme
Location: 6334 - 8283 (+)
Gene ID: k141_55295_8
Type: CAZyme
Location: 8304 - 10256 (+)
Gene ID: k141_55295_9
Type: CAZyme
Location: 10261 - 12015 (+)
Gene ID: k141_55295_10
Type: CAZyme
Location: 12088 - 13725 (+)
Gene ID: k141_55295_11
Type: CAZyme
Location: 13801 - 15282 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_55295_11 vegetarian > vegan 1.05461 0.02217

🧭 Explore Read Mapping of CGC

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