dbCAN Logo

Cluster: CGMR041270_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_74966 k141_74966_17 17020 18246 + 2.A.23.4.1
TF k141_74966 k141_74966_18 18372 18623 + HTH_psq
CAZyme k141_74966 k141_74966_19 18887 20389 + GH51_1
pfam k141_74966 k141_74966_20 20423 20722 + DUF6171
CAZyme k141_74966 k141_74966_21 20692 22620 + GH127
TF k141_74966 k141_74966_22 22814 23737 - MarR
CAZyme k141_74966 k141_74966_23 23940 24896 + GH43_26
CAZyme k141_74966 k141_74966_24 25004 26611 + GH43_4
TF k141_74966 k141_74966_25 26663 27586 - HTH_5
TC k141_74966 k141_74966_26 28004 29398 + 3.A.1.1.34
TC k141_74966 k141_74966_27 29714 30613 + 3.A.1.1.34
TC k141_74966 k141_74966_28 30615 31487 + 3.A.1.1.34
CAZyme k141_74966 k141_74966_29 31525 33048 + GH51_1
pfam k141_74966 k141_74966_30 34573 34830 + SpoIIID
CAZyme k141_74966 k141_74966_31 34904 35740 + CE1
TF k141_74966 k141_74966_32 35891 36718 - HTH_6
pfam k141_74966 k141_74966_33 37138 37881 + Glucosamine_iso
CAZyme k141_74966 k141_74966_34 38020 39123 + CE9
Gene ID: k141_74966_17
Type: TC
Location: 17020 - 18246 (+)
Gene ID: k141_74966_18
Type: TF
Location: 18372 - 18623 (+)
Gene ID: k141_74966_19
Type: CAZyme
Location: 18887 - 20389 (+)
Gene ID: k141_74966_20
Type: pfam
Location: 20423 - 20722 (+)
Gene ID: k141_74966_21
Type: CAZyme
Location: 20692 - 22620 (+)
Gene ID: k141_74966_22
Type: TF
Location: 22814 - 23737 (-)
Gene ID: k141_74966_23
Type: CAZyme
Location: 23940 - 24896 (+)
Gene ID: k141_74966_24
Type: CAZyme
Location: 25004 - 26611 (+)
Gene ID: k141_74966_25
Type: TF
Location: 26663 - 27586 (-)
Gene ID: k141_74966_26
Type: TC
Location: 28004 - 29398 (+)
Gene ID: k141_74966_27
Type: TC
Location: 29714 - 30613 (+)
Gene ID: k141_74966_28
Type: TC
Location: 30615 - 31487 (+)
Gene ID: k141_74966_29
Type: CAZyme
Location: 31525 - 33048 (+)
Gene ID: k141_74966_30
Type: pfam
Location: 34573 - 34830 (+)
Gene ID: k141_74966_31
Type: CAZyme
Location: 34904 - 35740 (+)
Gene ID: k141_74966_32
Type: TF
Location: 35891 - 36718 (-)
Gene ID: k141_74966_33
Type: pfam
Location: 37138 - 37881 (+)
Gene ID: k141_74966_34
Type: CAZyme
Location: 38020 - 39123 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_74966_20 vegetarian > omnivore 1.11722 0.02088
k141_74966_24 vegan > omnivore 1.95678 0.00604
k141_74966_25 vegan > omnivore 2.37159 0.00604
k141_74966_26 vegan > omnivore 1.18971 0.00604
k141_74966_27 vegan > omnivore 1.41296 0.00604
k141_74966_28 vegan > omnivore 1.38391 0.00604
k141_74966_29 vegan > omnivore 1.48448 0.00604
k141_74966_29 vegetarian > omnivore 1.42531 0.01810
k141_74966_30 vegan > omnivore 3.97253 0.00604
k141_74966_30 vegetarian > omnivore 3.42485 0.03429

🧭 Explore Read Mapping of CGC

← Back to Cluster List