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Cluster: CGMR041270_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_47608 k141_47608_8 6991 8835 - 8.A.59.2.1
STP k141_47608 k141_47608_9 9109 10344 + SBP_bac_1
TC k141_47608 k141_47608_10 10468 11346 + 3.A.1.1.41
TC k141_47608 k141_47608_11 11360 12217 + 3.A.1.1.17
CAZyme k141_47608 k141_47608_12 12253 13362 + GH172
STP k141_47608 k141_47608_13 13381 14628 + SBP_bac_1
TF k141_47608 k141_47608_14 14716 15651 + HTH_AraC | HTH_AraC
CAZyme k141_47608 k141_47608_15 15847 17511 + GH13_31
TF k141_47608 k141_47608_16 17722 18753 - LacI
CAZyme k141_47608 k141_47608_17 19101 20780 - GH13_31
Gene ID: k141_47608_8
Type: TC
Location: 6991 - 8835 (-)
Gene ID: k141_47608_9
Type: STP
Location: 9109 - 10344 (+)
Gene ID: k141_47608_10
Type: TC
Location: 10468 - 11346 (+)
Gene ID: k141_47608_11
Type: TC
Location: 11360 - 12217 (+)
Gene ID: k141_47608_12
Type: CAZyme
Location: 12253 - 13362 (+)
Gene ID: k141_47608_13
Type: STP
Location: 13381 - 14628 (+)
Gene ID: k141_47608_14
Type: TF
Location: 14716 - 15651 (+)
Gene ID: k141_47608_15
Type: CAZyme
Location: 15847 - 17511 (+)
Gene ID: k141_47608_16
Type: TF
Location: 17722 - 18753 (-)
Gene ID: k141_47608_17
Type: CAZyme
Location: 19101 - 20780 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_47608_13 vegan > omnivore 1.11253 0.00604
k141_47608_16 vegan > omnivore 1.18624 0.00604

🧭 Explore Read Mapping of CGC

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