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Cluster: CGMR041270_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82700 k141_82700_14 16797 17492 + 3.A.1.8.1
TC k141_82700 k141_82700_15 17492 18550 + 3.A.1.10.3
NULL(UNKNOWN) k141_82700 k141_82700_16 18673 19401 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_82700 k141_82700_17 19424 20068 - 9.B.28.1.2
TF k141_82700 k141_82700_18 20103 21176 - LacI
TC k141_82700 k141_82700_19 21526 22476 + 3.A.1.1.10
TC k141_82700 k141_82700_20 22491 23390 + 3.A.1.1.29
STP k141_82700 k141_82700_21 23406 25079 + SBP_bac_1
CAZyme k141_82700 k141_82700_22 25197 26681 + GH32
pfam k141_82700 k141_82700_23 26847 27935 - HTH_30 | GGDEF_2
TC k141_82700 k141_82700_24 28080 29192 - 3.A.1.1.26
Gene ID: k141_82700_14
Type: TC
Location: 16797 - 17492 (+)
Gene ID: k141_82700_15
Type: TC
Location: 17492 - 18550 (+)
Gene ID: k141_82700_16
Type:
Location: 18673 - 19401 (-)
Gene ID: k141_82700_17
Type: TC
Location: 19424 - 20068 (-)
Gene ID: k141_82700_18
Type: TF
Location: 20103 - 21176 (-)
Gene ID: k141_82700_19
Type: TC
Location: 21526 - 22476 (+)
Gene ID: k141_82700_20
Type: TC
Location: 22491 - 23390 (+)
Gene ID: k141_82700_21
Type: STP
Location: 23406 - 25079 (+)
Gene ID: k141_82700_22
Type: CAZyme
Location: 25197 - 26681 (+)
Gene ID: k141_82700_23
Type: pfam
Location: 26847 - 27935 (-)
Gene ID: k141_82700_24
Type: TC
Location: 28080 - 29192 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_82700_22 vegetarian > vegan 1.10640 0.02217

🧭 Explore Read Mapping of CGC

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