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Cluster: CGMR041270_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38063 k141_38063_53 60639 62456 + 8.A.59.2.1
TF k141_38063 k141_38063_54 62495 64009 + HTH_AraC
STP k141_38063 k141_38063_55 64048 65226 + SBP_bac_1
TC k141_38063 k141_38063_56 65342 66568 + 3.A.1.1.40
TC k141_38063 k141_38063_57 66737 67648 + 3.A.1.1.19
TC k141_38063 k141_38063_58 67648 68484 + 3.A.1.1.41
CAZyme k141_38063 k141_38063_59 68605 70548 + GH127
TC k141_38063 k141_38063_60 70671 71216 - 3.A.1.25.3
Gene ID: k141_38063_53
Type: TC
Location: 60639 - 62456 (+)
Gene ID: k141_38063_54
Type: TF
Location: 62495 - 64009 (+)
Gene ID: k141_38063_55
Type: STP
Location: 64048 - 65226 (+)
Gene ID: k141_38063_56
Type: TC
Location: 65342 - 66568 (+)
Gene ID: k141_38063_57
Type: TC
Location: 66737 - 67648 (+)
Gene ID: k141_38063_58
Type: TC
Location: 67648 - 68484 (+)
Gene ID: k141_38063_59
Type: CAZyme
Location: 68605 - 70548 (+)
Gene ID: k141_38063_60
Type: TC
Location: 70671 - 71216 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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