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Cluster: CGMR041270_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18767 k141_18767_7 7769 9604 + 9.B.33.1.1
TF k141_18767 k141_18767_8 9604 11217 + HTH_AraC | HTH_AraC
STP k141_18767 k141_18767_9 11445 12743 + SBP_bac_1
TC k141_18767 k141_18767_10 12818 13702 + 3.A.1.1.20
TC k141_18767 k141_18767_11 13699 14538 + 3.A.1.1.41
CAZyme k141_18767 k141_18767_12 14657 16048 + GH32
TC k141_18767 k141_18767_13 16215 17438 - 2.A.23.1.6
Gene ID: k141_18767_7
Type: TC
Location: 7769 - 9604 (+)
Gene ID: k141_18767_8
Type: TF
Location: 9604 - 11217 (+)
Gene ID: k141_18767_9
Type: STP
Location: 11445 - 12743 (+)
Gene ID: k141_18767_10
Type: TC
Location: 12818 - 13702 (+)
Gene ID: k141_18767_11
Type: TC
Location: 13699 - 14538 (+)
Gene ID: k141_18767_12
Type: CAZyme
Location: 14657 - 16048 (+)
Gene ID: k141_18767_13
Type: TC
Location: 16215 - 17438 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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