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Cluster: CGMR041270_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40165 k141_40165_46 52897 54435 - 2.A.21.2.4
pfam k141_40165 k141_40165_47 54688 55287 - DUF5662
CAZyme k141_40165 k141_40165_48 55265 57157 - GH13_11
pfam k141_40165 k141_40165_49 57271 58029 - Exo_endo_phos
pfam k141_40165 k141_40165_50 58248 58625 + DUF1292
CAZyme k141_40165 k141_40165_51 58834 61338 - GH2
Gene ID: k141_40165_46
Type: TC
Location: 52897 - 54435 (-)
Gene ID: k141_40165_47
Type: pfam
Location: 54688 - 55287 (-)
Gene ID: k141_40165_48
Type: CAZyme
Location: 55265 - 57157 (-)
Gene ID: k141_40165_49
Type: pfam
Location: 57271 - 58029 (-)
Gene ID: k141_40165_50
Type: pfam
Location: 58248 - 58625 (+)
Gene ID: k141_40165_51
Type: CAZyme
Location: 58834 - 61338 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40165_48 vegan > omnivore 1.08394 0.00604

🧭 Explore Read Mapping of CGC

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