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Cluster: CGMR041270_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_63916 k141_63916_23 27653 28825 - 3.A.1.2.5
TC k141_63916 k141_63916_24 28831 30369 - 3.A.1.2.5
TC k141_63916 k141_63916_25 30533 31600 - 3.A.1.2.5
TC k141_63916 k141_63916_26 31873 32994 - 3.A.1.2.4
TF k141_63916 k141_63916_27 32994 34589 - HTH_AraC | HTH_AraC
TC k141_63916 k141_63916_28 34653 36125 - 8.A.59.2.1
STP k141_63916 k141_63916_29 36122 37141 - Peripla_BP_1
CAZyme k141_63916 k141_63916_30 37313 38113 + CE4
TC k141_63916 k141_63916_31 38227 39018 + 9.B.28.1.2
Gene ID: k141_63916_23
Type: TC
Location: 27653 - 28825 (-)
Gene ID: k141_63916_24
Type: TC
Location: 28831 - 30369 (-)
Gene ID: k141_63916_25
Type: TC
Location: 30533 - 31600 (-)
Gene ID: k141_63916_26
Type: TC
Location: 31873 - 32994 (-)
Gene ID: k141_63916_27
Type: TF
Location: 32994 - 34589 (-)
Gene ID: k141_63916_28
Type: TC
Location: 34653 - 36125 (-)
Gene ID: k141_63916_29
Type: STP
Location: 36122 - 37141 (-)
Gene ID: k141_63916_30
Type: CAZyme
Location: 37313 - 38113 (+)
Gene ID: k141_63916_31
Type: TC
Location: 38227 - 39018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_63916_29 vegan > omnivore 1.07470 0.00604

🧭 Explore Read Mapping of CGC

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