Cluster: CGMR041270_CGC12
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR041270
- CGC Family ID: CGCFAM_01219
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_63916 | k141_63916_3 | 1367 | 3568 | - | GH36 |
| TC | k141_63916 | k141_63916_4 | 3637 | 4302 | - | 9.B.28.1.2 |
| TC | k141_63916 | k141_63916_5 | 4511 | 5335 | - | 3.A.1.1.36 |
| TC | k141_63916 | k141_63916_6 | 5348 | 6241 | - | 3.A.1.1.25 |
| TC | k141_63916 | k141_63916_7 | 6407 | 7672 | - | 3.A.1.1.26 |
| TF | k141_63916 | k141_63916_8 | 7915 | 8820 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_63916 | k141_63916_9 | 8904 | 11126 | - | GH36 |
| TF | k141_63916 | k141_63916_10 | 11343 | 12254 | - | HTH_AraC |
| TC | k141_63916 | k141_63916_11 | 12307 | 13302 | - | 8.A.5.1.3 |
| NULL(UNKNOWN) | k141_63916 | k141_63916_12 | 13340 | 13798 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_63916 | k141_63916_13 | 13749 | 14201 | - | DUF4869 |
| TC | k141_63916 | k141_63916_14 | 14942 | 16288 | - | 2.A.2.3.3 |
| TC | k141_63916 | k141_63916_15 | 16278 | 17645 | - | 2.A.2.3.3 |
| CAZyme | k141_63916 | k141_63916_16 | 17673 | 18932 | - | GH27 |
| TF | k141_63916 | k141_63916_17 | 19252 | 20124 | + | HTH_AraC |
| CAZyme | k141_63916 | k141_63916_18 | 20181 | 23366 | - | GH2 |
Gene ID: k141_63916_3
Type: CAZyme
Location: 1367 - 3568 (-)
Type: CAZyme
Location: 1367 - 3568 (-)
Gene ID: k141_63916_4
Type: TC
Location: 3637 - 4302 (-)
Type: TC
Location: 3637 - 4302 (-)
Gene ID: k141_63916_5
Type: TC
Location: 4511 - 5335 (-)
Type: TC
Location: 4511 - 5335 (-)
Gene ID: k141_63916_6
Type: TC
Location: 5348 - 6241 (-)
Type: TC
Location: 5348 - 6241 (-)
Gene ID: k141_63916_7
Type: TC
Location: 6407 - 7672 (-)
Type: TC
Location: 6407 - 7672 (-)
Gene ID: k141_63916_8
Type: TF
Location: 7915 - 8820 (+)
Type: TF
Location: 7915 - 8820 (+)
Gene ID: k141_63916_9
Type: CAZyme
Location: 8904 - 11126 (-)
Type: CAZyme
Location: 8904 - 11126 (-)
Gene ID: k141_63916_10
Type: TF
Location: 11343 - 12254 (-)
Type: TF
Location: 11343 - 12254 (-)
Gene ID: k141_63916_11
Type: TC
Location: 12307 - 13302 (-)
Type: TC
Location: 12307 - 13302 (-)
Gene ID: k141_63916_12
Type:
Location: 13340 - 13798 (-)
Type:
Location: 13340 - 13798 (-)
Gene ID: k141_63916_13
Type: pfam
Location: 13749 - 14201 (-)
Type: pfam
Location: 13749 - 14201 (-)
Gene ID: k141_63916_14
Type: TC
Location: 14942 - 16288 (-)
Type: TC
Location: 14942 - 16288 (-)
Gene ID: k141_63916_15
Type: TC
Location: 16278 - 17645 (-)
Type: TC
Location: 16278 - 17645 (-)
Gene ID: k141_63916_16
Type: CAZyme
Location: 17673 - 18932 (-)
Type: CAZyme
Location: 17673 - 18932 (-)
Gene ID: k141_63916_17
Type: TF
Location: 19252 - 20124 (+)
Type: TF
Location: 19252 - 20124 (+)
Gene ID: k141_63916_18
Type: CAZyme
Location: 20181 - 23366 (-)
Type: CAZyme
Location: 20181 - 23366 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp003471165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_63916_7 | vegan > omnivore | 1.22828 | 0.00604 |
| k141_63916_12 | vegetarian > vegan | 1.62495 | 0.01229 |
| k141_63916_13 | vegetarian > vegan | 1.58616 | 0.02217 |