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Cluster: CGMR041270_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39424 k141_39424_26 30316 32556 - 9.B.142.1.2
NULL(UNKNOWN) k141_39424 k141_39424_27 32570 34747 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_39424 k141_39424_28 34950 35642 - Amidase_3
CAZyme k141_39424 k141_39424_29 35741 37387 - GH18
pfam k141_39424 k141_39424_30 38290 39036 + MecA
pfam k141_39424 k141_39424_31 39117 39317 - DUF1858
TC k141_39424 k141_39424_32 39484 40464 - 3.A.1.2.17
TC k141_39424 k141_39424_33 40477 41556 - 3.A.1.2.10
TC k141_39424 k141_39424_34 41553 43088 - 3.A.1.2.12
Gene ID: k141_39424_26
Type: TC
Location: 30316 - 32556 (-)
Gene ID: k141_39424_27
Type:
Location: 32570 - 34747 (-)
Gene ID: k141_39424_28
Type: pfam
Location: 34950 - 35642 (-)
Gene ID: k141_39424_29
Type: CAZyme
Location: 35741 - 37387 (-)
Gene ID: k141_39424_30
Type: pfam
Location: 38290 - 39036 (+)
Gene ID: k141_39424_31
Type: pfam
Location: 39117 - 39317 (-)
Gene ID: k141_39424_32
Type: TC
Location: 39484 - 40464 (-)
Gene ID: k141_39424_33
Type: TC
Location: 40477 - 41556 (-)
Gene ID: k141_39424_34
Type: TC
Location: 41553 - 43088 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_39424_28 vegan > omnivore 1.92272 0.00604
k141_39424_28 vegetarian > omnivore 1.51556 0.04179
k141_39424_31 vegetarian > omnivore 1.10711 0.04179

🧭 Explore Read Mapping of CGC

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