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Cluster: CGMR041270_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39424 k141_39424_3 3293 5002 - 3.A.1.1.9
TC k141_39424 k141_39424_4 4999 6693 - 9.B.33.1.1
TF k141_39424 k141_39424_5 6668 8206 - HTH_AraC | HTH_AraC
TC k141_39424 k141_39424_6 8324 9163 - 3.A.1.1.45
TC k141_39424 k141_39424_7 9163 10017 - 3.A.1.1.45
TC k141_39424 k141_39424_8 10104 11378 - 3.A.1.1.45
pfam k141_39424 k141_39424_9 11603 12466 - F_bP_aldolase
CAZyme k141_39424 k141_39424_10 12978 15083 - CBM34 | GH13_39
TC k141_39424 k141_39424_11 15669 17519 - 3.A.16.1.1
Gene ID: k141_39424_3
Type: TC
Location: 3293 - 5002 (-)
Gene ID: k141_39424_4
Type: TC
Location: 4999 - 6693 (-)
Gene ID: k141_39424_5
Type: TF
Location: 6668 - 8206 (-)
Gene ID: k141_39424_6
Type: TC
Location: 8324 - 9163 (-)
Gene ID: k141_39424_7
Type: TC
Location: 9163 - 10017 (-)
Gene ID: k141_39424_8
Type: TC
Location: 10104 - 11378 (-)
Gene ID: k141_39424_9
Type: pfam
Location: 11603 - 12466 (-)
Gene ID: k141_39424_10
Type: CAZyme
Location: 12978 - 15083 (-)
Gene ID: k141_39424_11
Type: TC
Location: 15669 - 17519 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_39424_8 vegetarian > omnivore 1.02412 0.04011
k141_39424_8 vegetarian > vegan 1.27564 0.02217

🧭 Explore Read Mapping of CGC

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