Cluster: CGMR041183_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR041183
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_603886 | k141_603886_7 | 7321 | 11601 | + | GT3 | GT35 |
| pfam | k141_603886 | k141_603886_8 | 11897 | 12244 | + | RBFA |
| CAZyme | k141_603886 | k141_603886_9 | 12269 | 14575 | + | GH20 |
| pfam | k141_603886 | k141_603886_10 | 14905 | 15363 | + | PTPS |
| sulfatase | k141_603886 | k141_603886_11 | 15390 | 18260 | + | S1_2 |
| TC | k141_603886 | k141_603886_12 | 18432 | 18791 | + | 2.A.7.34.6 |
Gene ID: k141_603886_7
Type: CAZyme
Location: 7321 - 11601 (+)
Type: CAZyme
Location: 7321 - 11601 (+)
Gene ID: k141_603886_8
Type: pfam
Location: 11897 - 12244 (+)
Type: pfam
Location: 11897 - 12244 (+)
Gene ID: k141_603886_9
Type: CAZyme
Location: 12269 - 14575 (+)
Type: CAZyme
Location: 12269 - 14575 (+)
Gene ID: k141_603886_10
Type: pfam
Location: 14905 - 15363 (+)
Type: pfam
Location: 14905 - 15363 (+)
Gene ID: k141_603886_11
Type: sulfatase
Location: 15390 - 18260 (+)
Type: sulfatase
Location: 15390 - 18260 (+)
Gene ID: k141_603886_12
Type: TC
Location: 18432 - 18791 (+)
Type: TC
Location: 18432 - 18791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Species
Rikenella sp947628055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.