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Cluster: CGMR040985_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_7533 k141_7533_49 56480 59518 + GH38
pfam k141_7533 k141_7533_50 59537 60223 + Lyx_isomer
STP k141_7533 k141_7533_51 60233 61186 + PfkB
TC k141_7533 k141_7533_52 61203 62645 + 2.A.37.3.3
pfam k141_7533 k141_7533_53 62648 63367 + MgtC
TC k141_7533 k141_7533_54 63477 64466 + 8.A.5.1.3
pfam k141_7533 k141_7533_55 64472 64897 + PCC
TC k141_7533 k141_7533_56 65894 66823 + 4.A.1.2.4
Gene ID: k141_7533_49
Type: CAZyme
Location: 56480 - 59518 (+)
Gene ID: k141_7533_50
Type: pfam
Location: 59537 - 60223 (+)
Gene ID: k141_7533_51
Type: STP
Location: 60233 - 61186 (+)
Gene ID: k141_7533_52
Type: TC
Location: 61203 - 62645 (+)
Gene ID: k141_7533_53
Type: pfam
Location: 62648 - 63367 (+)
Gene ID: k141_7533_54
Type: TC
Location: 63477 - 64466 (+)
Gene ID: k141_7533_55
Type: pfam
Location: 64472 - 64897 (+)
Gene ID: k141_7533_56
Type: TC
Location: 65894 - 66823 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Faecousia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_7533_54 vegan > omnivore 1.04859 0.00364

🧭 Explore Read Mapping of CGC

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