Cluster: CGMR040515_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR040515
- CGC Family ID: CGCFAM_08578
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_500690 | k141_500690_4 | 3860 | 4678 | - | 3.A.1.5.20 |
| TC | k141_500690 | k141_500690_5 | 4681 | 5712 | - | 3.A.1.5.20 |
| NULL(UNKNOWN) | k141_500690 | k141_500690_6 | 5718 | 6236 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_500690 | k141_500690_7 | 6243 | 6851 | - | RdgC |
| CAZyme | k141_500690 | k141_500690_8 | 7152 | 8414 | + | GT9 |
Gene ID: k141_500690_4
Type: TC
Location: 3860 - 4678 (-)
Type: TC
Location: 3860 - 4678 (-)
Gene ID: k141_500690_5
Type: TC
Location: 4681 - 5712 (-)
Type: TC
Location: 4681 - 5712 (-)
Gene ID: k141_500690_6
Type:
Location: 5718 - 6236 (-)
Type:
Location: 5718 - 6236 (-)
Gene ID: k141_500690_7
Type: pfam
Location: 6243 - 6851 (-)
Type: pfam
Location: 6243 - 6851 (-)
Gene ID: k141_500690_8
Type: CAZyme
Location: 7152 - 8414 (+)
Type: CAZyme
Location: 7152 - 8414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Frigididesulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.