Cluster: CGMR040515_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR040515
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_145427 | k141_145427_4 | 3171 | 3812 | - | 9.A.25.1.1 |
| STP | k141_145427 | k141_145427_5 | 4147 | 4833 | + | TetR_N |
| NULL(UNKNOWN) | k141_145427 | k141_145427_6 | 5224 | 5487 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_145427 | k141_145427_7 | 5714 | 6274 | + | 2.A.96.1.1 |
| TC | k141_145427 | k141_145427_8 | 7343 | 8869 | + | 1.B.61.1.4 |
| pfam | k141_145427 | k141_145427_9 | 9030 | 10439 | + | GSDH |
| CAZyme | k141_145427 | k141_145427_10 | 11265 | 12941 | - | GT4 |
| NULL(UNKNOWN) | k141_145427 | k141_145427_11 | 13618 | 14226 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_145427 | k141_145427_12 | 14469 | 15227 | - | adh_short | KR | adh_short_C2 |
| TC | k141_145427 | k141_145427_13 | 15323 | 16612 | - | 2.A.56.1.1 |
| pfam | k141_145427 | k141_145427_14 | 16615 | 17082 | - | DctQ |
| TC | k141_145427 | k141_145427_15 | 17091 | 18122 | - | 2.A.56.1.2 |
Gene ID: k141_145427_4
Type: TC
Location: 3171 - 3812 (-)
Type: TC
Location: 3171 - 3812 (-)
Gene ID: k141_145427_5
Type: STP
Location: 4147 - 4833 (+)
Type: STP
Location: 4147 - 4833 (+)
Gene ID: k141_145427_6
Type:
Location: 5224 - 5487 (-)
Type:
Location: 5224 - 5487 (-)
Gene ID: k141_145427_7
Type: TC
Location: 5714 - 6274 (+)
Type: TC
Location: 5714 - 6274 (+)
Gene ID: k141_145427_8
Type: TC
Location: 7343 - 8869 (+)
Type: TC
Location: 7343 - 8869 (+)
Gene ID: k141_145427_9
Type: pfam
Location: 9030 - 10439 (+)
Type: pfam
Location: 9030 - 10439 (+)
Gene ID: k141_145427_10
Type: CAZyme
Location: 11265 - 12941 (-)
Type: CAZyme
Location: 11265 - 12941 (-)
Gene ID: k141_145427_11
Type:
Location: 13618 - 14226 (-)
Type:
Location: 13618 - 14226 (-)
Gene ID: k141_145427_12
Type: pfam
Location: 14469 - 15227 (-)
Type: pfam
Location: 14469 - 15227 (-)
Gene ID: k141_145427_13
Type: TC
Location: 15323 - 16612 (-)
Type: TC
Location: 15323 - 16612 (-)
Gene ID: k141_145427_14
Type: pfam
Location: 16615 - 17082 (-)
Type: pfam
Location: 16615 - 17082 (-)
Gene ID: k141_145427_15
Type: TC
Location: 17091 - 18122 (-)
Type: TC
Location: 17091 - 18122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Frigididesulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.