Cluster: CGMR040515_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR040515
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_194518 | k141_194518_18 | 22661 | 23782 | - | GT28 |
| TC | k141_194518 | k141_194518_19 | 23785 | 24903 | - | 2.A.103.1.3 |
| pfam | k141_194518 | k141_194518_20 | 24900 | 26222 | - | AlaDh_PNT_C | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_194518 | k141_194518_21 | 26238 | 27314 | - | 9.B.146.1.6 |
Gene ID: k141_194518_18
Type: CAZyme
Location: 22661 - 23782 (-)
Type: CAZyme
Location: 22661 - 23782 (-)
Gene ID: k141_194518_19
Type: TC
Location: 23785 - 24903 (-)
Type: TC
Location: 23785 - 24903 (-)
Gene ID: k141_194518_20
Type: pfam
Location: 24900 - 26222 (-)
Type: pfam
Location: 24900 - 26222 (-)
Gene ID: k141_194518_21
Type: TC
Location: 26238 - 27314 (-)
Type: TC
Location: 26238 - 27314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Frigididesulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.