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Cluster: CGMR040451_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6869 k141_6869_46 42182 43579 - 2.A.3.1.20
pfam k141_6869 k141_6869_47 43884 45533 - NFACT-R_1 | NFACT_N
TC k141_6869 k141_6869_48 45795 46796 + 3.A.1.34.1
TC k141_6869 k141_6869_49 46907 47776 + 3.A.1.34.1
TC k141_6869 k141_6869_50 47773 48531 + 3.A.1.34.1
pfam k141_6869 k141_6869_51 48778 50442 + Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
NULL(UNKNOWN) k141_6869 k141_6869_52 50536 50850 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_6869 k141_6869_53 50930 51721 + CE1
Gene ID: k141_6869_46
Type: TC
Location: 42182 - 43579 (-)
Gene ID: k141_6869_47
Type: pfam
Location: 43884 - 45533 (-)
Gene ID: k141_6869_48
Type: TC
Location: 45795 - 46796 (+)
Gene ID: k141_6869_49
Type: TC
Location: 46907 - 47776 (+)
Gene ID: k141_6869_50
Type: TC
Location: 47773 - 48531 (+)
Gene ID: k141_6869_51
Type: pfam
Location: 48778 - 50442 (+)
Gene ID: k141_6869_52
Type:
Location: 50536 - 50850 (-)
Gene ID: k141_6869_53
Type: CAZyme
Location: 50930 - 51721 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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